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Submissions from 2020

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An Introduction to the Geostationary-NASA Earth Exchange (GeoNEX) Products: 1. Top-of-Atmosphere Reflectance and Brightness Temperature, Weile Wang, Shuang Li, Hirofumi Hashimoto, Hideaki Takenaka, Atsushi Higuchi, Satya Kalluri, and Ramakrishna Nemani

Submissions from 2019

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The molecular biogeography of the Indo‐Pacific: Testing hypotheses with multispecies genetic patterns, Eric D. Crandall, Cynthia Riginos, Chris E. Bird, Libby Liggins, Eric Treml, Maria Beger, Paul H. Barber, Sean R. Connolly, Peter F. Cowman, Joseph D. DiBattista, Jeff A. Eble, Sharon F. Magnuson, John B. Horne, Marc Kochzius, Harilaos A. Lessios, Shang Yin Vanson Liu, William B. Ludt, Hawis Madduppa, John M. Pandolfi, Robert J. Toonen, Contributing Members of the Diversity of the Indo‐Pacific Network, and Michelle R. Gaither

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A Coalescent Sampler Successfully Detects Biologically Meaningful Population Structure Overlooked by F‐Statistics, Eric D. Crandall, Robert J. Toonen, ToBo Laboratory, and Kimberly A. Selkoe

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Dosage Compensation and Gene Expression of the X Chromosome in Sheep, Jingyue (Ellie) Duan, Kaleigh Flock, Nathanial Jue, Mingyuan Zhang, Amanda Jones, Sahar Al Seesi, Ion Mandoiu, Sambhu Pillai, Maria Hoffman, Rachel O’Neill, Steven Zinn, Kristen Govoni, Sarah Reed, Hesheng Jiang, Zongliang (Carl) Jiang, and Xiuchun (Cindy) Tian

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Constraints to Vegetation Growth Reduced by Region-Specific Changes in Seasonal Climate, Hirofumi Hashimoto, Ramakrishna R. Nemani, Govindasamy Bala, Long Cao, Andrew R. Michaelis, Sangram Ganguly, Weile Wang, Cristina Milesi, Ryan Eastman, Tsengdar Lee, and Ranga Myneni

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Accounting for Unintended Consequences of Resource Policy: Connecting Research that Addresses Displacement of Environmental Impacts, Rebecca L. Lewison, Andrew F. Johnson, Jianbang Gan, Robin Pelc, Katie Westfall, and Mark Helvey

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First Provisional Land Surface Reflectance Product from Geostationary Satellite Himawari-8 AHI, Shuang Li, Weile Wang, Hirofumi Hashimoto, Jun Xiong, Thomas Vandal, Jing Yao, Lexiang Qian, Kazuhito Ichii, Alexei Lyapustin, Yujie Wang, and Ramakrishna Nemani

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Draft Genome Assembly and Annotation of the Gila Topminnow Poeciliopsis occidentalis, Mariana Mateos, Du Kang, Christophe Klopp, Hugues Parrinello, Mateo García-Olazábal, Molly Schumer, Nathaniel K. Jue, Yann Guiguen, and Manfred Schartl

Submissions from 2018

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Monitoring Crop Evapotranspiration and Crop Coefficients over an Almond and Pistachio Orchard Throughout Remote Sensing, Joaquim Bellvert, Karine Adeline, Shahar Baram, Lars Pierce, Blake L. Sanden, and David R. Smart

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Foraging Investment in a Long‐Lived Herbivore and Vulnerability to Coursing and Stalking Predators, David Christianson, Matthew S. Becker, Angela Brennan, Scott Creel, Egil Dröge, Jassiel M'soka, Teddy Mukula, Paul Schuette, Daan Smit, and Fred Watson

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Geology of the Alarcon Rise, Southern Gulf of California, David A. Clague, David W. Caress, Brian M. Dreyer, Lonny Lundsten, Jennifer B. Paduan, Ryan A. Portner, Ronald Spelz‐Madero, Julie A. Bowles, Paterno R. Castillo, Rigoberto Guardado‐France, Morgane Le Saout, Julie F. Martin, Miguel A. Santa Rosa‐del Río, and Robert A. Zierenberg

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Integrating Children and Youth Participation into Resilience Planning: Lessons from Three Resilient Cities, Victoria Derr, Maria Sitzoglou, Tuline Gülgönen, and Yolanda Corona

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Dosage Compensation of the X Chromosomes in Bovine Germline, Early Embryos, and Somatic Tissues, Jingyue (Ellie) Duan, Wei Shi, Nathaniel K. Jue, Zongliang Jiang, Lynn Kuo, Rachel O’Neill, Eckhard Wolf, Hong Dong, Xinbao Zheng, and Xiuchun (Cindy) Tian

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The relationship between observational scale and explained variance in benthic communities, Alison M. Flanagan, Roger D. Flood, Michael G. Frisk, Corey D. Garza, Glenn R. Lopez, Nicole P. Maher, and Robert M. Cerrato

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Tissue-Specific Transcriptome for Poeciliopsis prolifica Reveals Evidence for Genetic Adaptation Related to the Evolution of a Placental Fish, Nathaniel K. Jue, Robert J. Foley, David N. Reznick, Rachel J. O’Neill, and Michael J. O’Neill

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Development of Swimming Abilities in Squid Paralarvae: Behavioral and Ecological Implications for Dispersal, Erica A. G. Vidal, Louis D. Zeidberg, and Edward J. Buskey

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An Interplay between Photons, Canopy Structure, and Recollision Probability: A Review of the Spectral Invariants Theory of 3D Canopy Radiative Transfer Processes, Weile Wang, Ramakrishna Nemani, Hirofumi Hashimoto, Sangram Ganguly, Dong Huang, Yuri Knyazikhin, Ranga Myneni, and Govindasamy Bala

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A Low Cost System for Detecting Fog Events and Triggering an Active Fog Water Collector, Peter Weiss-Penzias, Daniel Fernandez, Robert Moranville, and Chad Saltikov

Submissions from 2017

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Genomic models predict successful coral adaptation if future ocean warming rates are reduced, Rachael A. Bay, Noah H. Rose, Cheryl A. Logan, and Stephen R. Palumbi

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New Approaches to Irrigation Scheduling of Vegetables, Michael D. Cahn and Lee F. Johnson

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The Genomic Observatories Metadatabase (GeOMe): A New Repository for Field and Sampling Event Metadata Associated with Genetic Samples, John Deck, Michelle R. Gaither, Rodney Ewing, Christopher E. Bird, Neil Davies, Christopher Meyer, Cynthia Riginos, Robert J. Toonen, and Eric D. Crandall

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Vegetation classification of Coffea on Hawaii Island using WorldView-2 satellite imagery, Julie Gaertner, Vanessa Brooks Genovese, Christopher Potter, Kelvin Sewake, and Nicholas C. Manoukis

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Species-Specific Responses of Juvenile Rockfish to Elevated pCO2: From Behavior to Genomics, Scott L. Hamilton, Cheryl A. Logan, Hamilton W. Fennie, Susan M. Sogard, James P. Barry, April D. Makukhov, Lauren R. Tobosa, Kirsten Boyer, Christopher F. Lovera, and Giacomo Bernardi

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Exploring Subpixel Learning Algorithms for Estimating Global Land Cover Fractions from Satellite Data Using High Performance Computing, Uttam Kumar, Sangram Ganguly, Ramakrishna R. Nemani, Kumar S. Raja, Cristina Milesi, Ruchita Sinha, Andrew Michaelis, Petr Votava, Hirofumi Hashimoto, Shuang Li, Weile Wang, Subodh Kalia, and Shreekant Gayaka

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Quantitative PCR assays for detection of five Alaskan fish species: Lota lota, Salvelinus alpinus, Salvelinus malma, Thymallus arcticus, and Cottus cognatus from environmental DNA, Torrey W. Rodgers, John R. Olson, Stephen L. Klobucar, and Karen E. Mock

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Daily Mapping of 30 m LAI and NDVI for Grape Yield Prediction in California Vineyards, Liang Sun, Feng Gao, Martha C. Anderson, William P. Kustas, Maria M. Alsina, Luis Sanchez, Brent Sams, Lynn McKee, Wayne Dulaney, William A. White, Joseph G. Alfieri, John H. Prueger, Forrest Melton, and Kirk Post

Submissions from 2016

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Engaging Citizens and Transforming Designers: Analysis of a Campus-Community Partnership Through the Lens of Children’s Rights to Participation, Victoria Derr, Laura Healey Malinin, and Meredith Banasiak

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Early Ocean Distribution of Juvenile Chinook Salmon in an Upwelling Ecosystem, Jason L. Hassrick, Mark J. Henderson, David D. Huff, William J. Sydeman, Megan C. Sabal, Jeffrey A. Harding, Arnold J. Ammann, Eric D. Crandall, Eric Bjorkstedt, John Carlos Garza, and Sean A. Hayes

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Evaluation of modelled net primary production using MODIS and landsat satellite data fusion, Steven Jay, Christopher Potter, Robert Crabtree, Vanessa Genovese, Daniel J. Weiss, and Maggi Kraft

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Rapid Evolutionary Rates and Unique Genomic Signatures Discovered in the First Reference Genome for the Southern Ocean Salp, Salpa thompsoni (Urochordata, Thaliacea), Nathaniel K. Jue, Paola G. Batta-Lona, Sarah Trusiak, Craig Obergfell, Ann Bucklin, Michael J. O’Neill, and Rachel J. O’Neill

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Using a Concept Inventory to Assess the Reasoning Component of Citizen-Level Science Literacy: Results from a 17,000-Student Study, Edward B. Nuhfer, Christopher B. Cogan, Carl Kloock, Gregory G. Wood, Anya Goodman, Natalie Zayas Delgado, and Christopher W. Wheeler

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Navigating the Currents of Seascape Genomics: How Spatial Analyses can Augment Population Genomic Studies, Cynthia Riginos, Eric D. Crandall, Libby Liggins, Pim Bongaerts, and Eric A. Treml

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Total- and Monomethyl-Mercury and Major Ions in Coastal California Fog Water: Results from Two Years of Sampling on Land and at Sea, Peter Weiss-Penzias, Kenneth Coale, Wesley Heim, Daniel Fernandez, Andrew Oliphant, Celeste Dodge, Dave Hoskins, James Farlin, Robert Moranville, and Alex Olson

Submissions from 2015

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Geo-Referenced, Abundance Calibrated Ocean Distribution of Chinook Salmon (Oncorhynchus tshawytscha) Stocks across the West Coast of North America, M. Renee Bellinger, Michael A. Banks, Sarah J. Bates, Eric D. Crandall, John Carlos Garza, Gil Sylvia, and Peter W. Lawson

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Reaching Out to Underserved Communities, Corey Garza

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A climate-informed, ecosystem approach to fisheries management, Adel Heenan, Robert Pomeroy, Johann Bell, Philip L. Munday, William Cheung, Cheryl Logan, Russell Brainard, Affendi Yang Amri, Porfirio Aliño, Nygiel Armada, Laura David, Rebecca Rivera-Guieb, Stuart Green, Jamaluddin Jompa, Teresa Leonardo, Samuel Mamauag, Britt Parker, Janna Shackeroff, and Zulfigar Yasin

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Melting Barriers to Faunal Exchange Across Ocean Basins, C. Seabird McKeon, Michele X. Weber, S. Elizabeth Alter, Nathaniel E. Seavy, Eric D. Crandall, Dan Barshis, Ethan D. Fechter-Leggett, and Kirsten L.L. Oleson

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Stock Composition and Ocean Spatial Distribution Inference from California Recreational Chinook Salmon Fisheries Using Genetic Stock Identification, William H. Satterthwaite, Javier Ciancio, Eric D. Crandall, Melodie L. Palmer-Zwahlen, Allen M. Grover, Michael R. O'Farrell, Eric C. Anderson, Michael S. Mohr, and John Carlos Garza

Submissions from 2014

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Advancing Biodiversity Research in Developing Countries: The Need for Changing Paradigms, Paul H. Barber, Ma Carmen A. Ablan-Lagman, Ambariyanto, Roberto GS Berlinck, Dita Cahyani, Eric D. Crandall, Rachel Ravago-Gotanco, Marie Antonette Juinio-Menez, Ig Ngurah Mahardika, Kartik Shanker, Craig J. Starger, Abdul Hamid A Toha, Aji W. Anggoro, and Demian A. Willette

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Evolving Coral Reef Conservation with Genetic Information, Maria Beger, Kimberly A. Selkoe, Eric Treml, Paul H. Barber, Sophie von der Heyden, Eric D. Crandall, Robert J. Toonen, and Cynthia Riginos

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Phylogeography Unplugged: Comparative Surveys in the Genomic Era, Brian W. Bowen, Kartik Shanker, Nina Yasuda, Maria Celia (Machel) D. Malay, Sophie von der Heyden, Gustav Paulay, Luiz A. Rocha, Kimberly A. Selkoe, Paul H. Barber, Suzanne T. Williams, Harilaos A. Lessios, Eric D. Crandall, Giacomo Bernardi, Christopher P. Meyer, Kent E. Carpenter, and Robert J. Toonen

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Trophic interactions and dynamic herbivore responses to snowpack, Jedediah F. Brodie, Eric Post, Joel Berger, and Fred Watson

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Evaluation of a Single Nucleotide Polymorphism Baseline for Genetic Stock Identification of Chinook Salmon (Oncorhynchus tshawytscha) in the California Current Large Marine Ecosystem, Anthony J. Clemento, Eric D. Crandall, John Carlos Garza, and Eric C. Anderson

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Return of the Ghosts of Dispersal Past: Historical Spread and Contemporary Gene Flow in the Blue Sea Star Linckia Laevigata, Eric D. Crandall

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Magnificent Dimensions, Varied Forms, and Brilliant Colors: The Molecular Ecology and Evolution of the Indian and Pacific Oceans, Eric D. Crandall and Cynthia Riginos

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The Scope of Published Population Genetic Data for Indo-Pacific Marine Fauna and Future Research Opportunities in the Region, Jude Keyse, Eric D. Crandall, Robert J. Toonen, Christopher P. Meyer, Eric A. Treml, and Cynthia Riginos

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An Approach to the Collection, Processing, and Analysis of Towed Camera Video Imagery for Marine Resource Management, Ashley Knight, James Lindholm, Andrew DeVogelaere, and Fred Watson

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Underperformance of African Protected Area Networks and the Case for New Conservation Models: Insights from Zambia, Peter A. Lindsey, Vincent R. Nyirenda, Jonathan I. Barnes, Matthew S. Becker, Rachel McRobb, Craig J. Tambling, W. Andrew Taylor, Frederick G. Watson, and Michael t’Sas-Rolfes

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The Impact of Fish and the Commercial Marine Harvest on the Ocean Iron Cycle, Allison R. Moreno and Arlene L. M Haffa

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Basin Isolation and Oceanographic Features Influencing Lineage Divergence in the Humbug Damselfish (Dascyllus aruanus) in the Coral Triangle, J M. Raynal, E D. Crandall, P H. Barber, G N. Mahardika, M C. Lagman, and K E. Carpenter

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Use of Genetic Stock Identification Data for Comparison of the Ocean Spatial Distribution, Size at Age, and Fishery Exposure of an Untagged Stock and Its Indicator: California Coastal versus Klamath River Chinook Salmon, William H. Satterthwaite, Michael S. Mohr, Michael R. O'Farrell, Eric C. Anderson, Michael A. Banks, Sarah J. Bates, M. Rence Bellinger, Lisa A. Borgerson, Eric D. Crandall, John Carlos Garza, Brett J. Kormos, Peter W. Lawson, and Melodie L. Palmer-Zwahlen

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So, You Want to Use Next-Generation Sequencing in Marine Systems? Insight from the Pan-Pacific Advanced Studies Institute, D A. Willette, F W. Allendorf, P H. Barber, D J. Barshis, K E. Carpenter, E D. Crandall, W A. Cresko, I Fernandez-Silva, M V. Katz, E Meyer, M D. Santos, L W. Seeb, and J E. Seeb

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Seasonal cultivated and fallow cropland mapping using MODIS-based automated cropland classification algorithm, Zhuoting Wu, Prasad S. Thenkabail, Rick Mueller, Forrest Melton, Lee Johnson, Carolyn Rosevelt, John Dwyer, Jeanine Jones, and James P. Verdin

Submissions from 2013

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Pronounced Genetic Structure in a Highly Mobile Coral Reef Fish, Caesio Cuning, in the Coral Triangle, Amanda S. Ackiss, Shinta Pardede, Eric D. Crandall, Ambariyanto, Ma. Carmen A. Ablan-Lagman, November Romena, Paul H. Barber, and Kent E. Carpenter

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Genetic Diversity, Population Structure, and Demographic History of Exploited Sea Urchin Populations (Tripneustes Gratilla) in the Philippines, Inggat Laya N. Casilagan, Marie Antonette Juinio-Menez, and Eric D. Crandall

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Relationship between community prevalence of obesity and associated behavioral factors and community rates of influenza-related hospitalizations in the United States, Katia M. Charland, David L. Buckeridge, Anne G. Hoen, Jay G. Berry, Anne Elixhauser, Forrest Melton, and John S. Brownstein

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A City for All Citizens: Integrating Children and Youth from Marginalized Populations into City Planning, Victoria Derr, Louise Chawla, Mara Mintzer, Debra Flanders Cushing, and Willem Van Vliet

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Structural Uncertainty in Model-Simulated Trends of Global Gross Primary Production, Hirofumi Hashimoto, Weile Wang, Cristina Milesi, Jun Xiong, Sangram Ganguly, Zaichun Zhu, and Ramakrishna R. Nemani

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Forecasting Distributional Responses of Limber Pine to Climate Change at Management-Relevant Scales in Rocky Mountain National Park, William B. Monahan, Tammy Cook, Forrest Melton, Jeff Connor, and Ben Bobowski

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Developing Site-Specific Nutrient Criteria from Empirical Models, John R. Olson and Charles P. Hawkins

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Alaska ecosystem carbon fluxes estimated from MODIS satellite data inputs from 2000 to 2010, Christopher Potter, Steven Klooster, and Vanessa Genovese

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Forest production predicted from satellite image analysis for the Southeast Asia region, Christopher Potter, Steven Klooster, Vanessa Genovese, and Cyrus Hiatt

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Linking Land Use, In-Stream Stressors, and Biological Condition to Infer Causes of Regional Ecological Impairment in Streams, Jacob J. Vander Laan, Charles P. Hawkins, John R. Olson, and Ryan A. Hill

Submissions from 2012

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Expansion Dating: Calibrating Molecular Clocks in Marine Species from Expansions onto the Sunda Shelf following the Last Glacial Maximum, Eric D. Crandall, Elizabeth J. Sbrocco, Timery S. DeBoer, Paul H. Barber, and Kent E. Carpenter

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Coalescent and Biophysical Models of Stepping-Stone Gene Flow in Neritid Snails, Eric D. Crandall, Eric A. Treml, and Paul H. Barber

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Exploring Simple Algorithms for Estimating Gross Primary Production in Forested Areas from Satellite Data, Hirofumi Hashimoto, Weile Wang, Cristina Milesi, Michael A. White, Sangram Ganguly, Minoru Gamo, Ryuichi Hirata, Ranga B. Myneni, and Ramakrishna R. Nemani

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Satellite NDVI Assisted Monitoring of Vegetable Crop Evapotranspiration in California’s San Joaquin Valley, Lee F. Johnson and Thomas J. Trout

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Predicting Natural Base-Flow Stream Water Chemistry in the Western United States, John R. Olson and Charles P. Hawkins

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Net primary production of terrestrial ecosystems from 2000 to 2009, Christopher Potter, Steven Klooster, and Vanessa Genovese

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Terrestrial Ecosystem Carbon Fluxes Predicted from MODIS Satellite Data and Large-Scale Disturbance Modeling, Christopher Potter, Steven Klooster, Vanessa Genovese, Cyrus Hiatt, Shyam Boriah, Vipin Kumar, Varun Mithal, and Ashish Garg

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Total and Monomethyl Mercury in Fog Water from the Central California Coast, Peter S. Weiss-Penzias, Cruz Ortiz Jr., R. Paul Acosta, Wesley Heim, John P. Ryan, Daniel Fernandez, Jeffrey L. Collett Jr., and A. Russell Flegal

Submissions from 2011

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Comparative Phylogeography of the Coral Triangle and Implications for Marine Management, Kent E. Carpenter, Paul H. Barber, Eric D. Crandall, Ma. Carmen A. Ablan-Lagman, Ambariyanto, Gusti Ngurah Mahardika, B. Mabel Manjaji-Matsumoto, Marie Antonette Juinio-Menez, Mudjekeewis D. Santos, Craig J. Starger, and Abdul Hamid A. Toha

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Predicting Bison Migration out of Yellowstone National Park Using Bayesian Models, Chris Geremia, P. J. White, Rick L. Wallen, Fred G. R. Watson, John J. Treanor, John Borkowski, Christopher S. Potter, and Robert L. Crabtree

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Carbon fluxes in ecosystems of Yellowstone National Park predicted from remote sensing data and simulation modeling, Christopher Potter, Steven Klooster, Robert Crabtree, Shengli Huang, Peggy Gross, and Vanessa Genovese

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Changes in the carbon cycle of Amazon ecosystems during the 2010 drought, Christopher Potter, Steven Klooster, Cyrus Hiatt, Vanessa Genovese, and Juan Carlos Castilla-Rubio

Submissions from 2010

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Propagule Pressure and Stream Characteristics Influence Introgression: Cutthroat and Rainbow Trout in British Columbia, Stephen N. Bennett, John R. Olson, Jeffrey L. Kershner, and Peter Corbett

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High Gene Flow Due to Pelagic Larval Dispersal Among South Pacific Archipelagos in Two Amphidromous Gastropods (Neritomorpha: Neritidae), Eric D. Crandall, Jonathan R. Taffel, and Paul H. Barber

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The Reference Condition: Predicting Benchmarks for Ecological and Water-Quality Assessments, Charles P. Hawkins, John R. Olson, and Ryan A. Hill

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Hydrodynamic Forces Affect Larval Zebra Mussel (Dreissena polymorpha) Mortality in a Laboratory Setting, Thomas Horvath and Lori Crane

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Decadal Variations in NDVI and Food Production in India, Cristina Milesi, Arindam Samanta, Hirofumi Hashimoto, K. Krishna Kumar, Sangram Ganguly, Prasad S. Thenkabail, Ashok N. Srivastava, Ramakrishna R. Nemani, and Ranga B. Myneni

Submissions from 2009

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Carbon emissions from deforestation in the Brazilian Amazon Region, C. Potter, S. Klooster, and V. Genovese

Submissions from 2008

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Contrasting Demographic History and Phylogeographic Patterns in Two Indo-Pacific Gastropods, Eric D. Crandall, Melissa A. Frey, Richard K. Grosberg, and Paul H. Barber

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Comparative Phylogeography of Two Seastars and Their Ectosymbionts Within the Coral Triangle, Eric D. Crandall, Mary Jones, Martha Munoz, Bolanle Akinronbi, Mark Erdmann, and Paul Barber

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Economically Viable Strategy for Prevention of Invasive Species Introduction: Case Study of Otsego Lake, New York, Thomas Horvath

Submissions from 2007

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Modeling Natural Environmental Gradients Improves the Accuracy and Precision of Diatom-Based Indicators, Yong Cao, Charles P. Hawkins, and John Olson

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Net primary productivity of forest stands in New Hampshire estimated from Landsat and MODIS satellite data, Christopher Potter, Peggy Gross, Vanessa Genovese, and Marie-Louise Smith

Submissions from 2004

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New Paleomagnetic, Rock Magnetic, and Petrographic Results from the Valle Group, Baja California, Mexico: Exploring the Causes of Anomalously Shallow Paleomagnetic Inclinations, Yong-Xiang Li, Kenneth P. Kodama, and Douglas P. Smith